BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019C12SP1|AL427466
(391 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1733 636 0.0
>3x_Contig1733
Length = 18615
Score = 636 bits (316), Expect = 0.0
Identities = 363/387 (93%), Gaps = 1/387 (0%)
Strand = Plus / Minus
Query: 2 gtcttgtcaccgaagaagtggatttctttgaaaccgtcggcttcgacgtgtctcaaacag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2913 gtcttgtcaccgaagaagtggatttctttgaaaccgtcggcttcgacgtgtctcaaacag 2854
Query: 62 taagtcttaycccaaccggttgggaaamcgtcaaatgamatttgaccaccgattgagaag 121
||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 2853 taagtcttatcccaaccggttgggaaaacgtcaaatgaaatttgaccaccgattgagaag 2794
Query: 122 gtcaaggacaaatgagcsaancccntctttagagcttcgacgaacttagctctgacttgg 181
||||||||||||||||| || || |||||||||||||||||||||||||||||||||||
Sbjct: 2793 gtcaaggacaaatgagcgaattccttctttagagcttcgacgaacttagctctgacttgg 2734
Query: 182 tgttccttatcaaattgttcaaattcgtttctttcagcagnagaagcgtnnctaccaatt 241
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 2733 tgttccttatcaaattgttcaaattcgtttctttcagcagtagaagcgtttctaccaatt 2674
Query: 242 ggngamacgntaatcanaccgnntcngaattccaagamagtacctcttctctttggcaaa 301
|| || ||| |||||| |||| || ||||||||||| |||||||||||| |||||||||
Sbjct: 2673 ggtgaaacgttaatcataccgtttctgaattccaagaaagtacctcttctatttggcaaa 2614
Query: 302 kcgatggaagccaagtattgcmagatgaatttggccaaacttgttgtattcttccccacc 361
|||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||
Sbjct: 2613 tcgatggaagccaagtattgcaagatgaatttggcc-aacttgttgtattcttcctcacc 2555
Query: 362 gayccattcgataaaggattgagaagc 388
|| ||||||||||||||||||||||||
Sbjct: 2554 gatccattcgataaaggattgagaagc 2528
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2062
Number of Sequences: 1807
Number of extensions: 2062
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 391
length of database: 10,358,551
effective HSP length: 15
effective length of query: 376
effective length of database: 10,331,446
effective search space: 3884623696
effective search space used: 3884623696
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.2 bits)